BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F07LP1|AL426245
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1514 0.0
>3x_Contig1795
Length = 38452
Score = 1514 bits (759), Expect = 0.0
Identities = 788/802 (98%), Gaps = 1/802 (0%)
Strand = Plus / Plus
Query: 1 tctatataatcatatagcaagaacattctagcacacagatatatcaacaagatggctcaa 60
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 6442 tctatataatcatatagcaagaacat-caagcacacagatatatcaacaagatggctcaa 6500
Query: 61 gtatgtgggaaacaagtgctatatccataccctggagaaattacgaaagaaaaggattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6501 gtatgtgggaaacaagtgctatatccataccctggagaaattacgaaagaaaaggattga 6560
Query: 121 ctcagcgatcatgacgacgaaatatagtaattggcgacatctattggcaatataaaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6561 ctcagcgatcatgacgacgaaatatagtaattggcgacatctattggcaatataaaatgt 6620
Query: 181 aatgaatgaattaacaccatagcataaatgagaacagtctggaccagatgctgttcgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6621 aatgaatgaattaacaccatagcataaatgagaacagtctggaccagatgctgttcgatt 6680
Query: 241 ccagttatgtacaagtgggatatcttaattcgaagttttaacgattgcnggaagagactt 300
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6681 ccagtaatgtacaagtgggatatcttaattcgaagttttaacgattgcaggaagagactt 6740
Query: 301 catatgataactggattcatgagataaaggratatatttdacggatctcacgactgagaa 360
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 6741 catatgataactggattcatgagataaaggaatatatttaacggatctcacgactgagaa 6800
Query: 361 ttatgggaacmatttaaacaagtacacaaaccaaggttcgcagactggaaganatatacg 420
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6801 ttatgggaacaatttaaacaagtacacaaaccaaggttcgcagactggaagaaatatacg 6860
Query: 421 gtcggractataaganatwawaatatgtgatactttaaatattcagtgttggtttatgga 480
||||| ||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 6861 gtcggaactataagaaataaaaatatgtgatactttaaatattcagtgttggtttatgga 6920
Query: 481 tatttgtatcatagatgactaacatcatgctaatccatctcctgttctttthatattttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6921 tatttgtatcatagatgactaacatcatgctaatccatctcctgttcttttaatattttc 6980
Query: 541 tatgggtttttcgttattgcctattttatggagaagaagttaacatgttttcatccatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6981 tatgggtttttcgttattgcctattttatggagaagaagttaacatgttttcatccatta 7040
Query: 601 ctcttagttttgttacatacagccgaactcatgtgagataatggaattgasactgtgggt 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 7041 ctcttagttttgttacatacagccgaactcatgtgagataatggaattgaaactgtgggt 7100
Query: 661 ttccttctctatacacgggcataactcgataaaatattgttttcagttttactaacaacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7101 ttccttctctatacacgggcataactcgataaaatattgttttcagttttactaacaacg 7160
Query: 721 aatttttcaattcaattttcaatacaggctcaaaagtggtatccagctgaagaagtccca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7161 aatttttcaattcaattttcaatacaggctcaaaagtggtatccagctgaagaagtccca 7220
Query: 781 gctccaaagcaaaccagaaagg 802
||||||||||||||||||||||
Sbjct: 7221 gctccaaagcaaaccagaaagg 7242
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5650
Number of Sequences: 1807
Number of extensions: 5650
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)